Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010043Neural-cadherin-like. (2706 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.614
LOC107562513
Junction plakoglobin-like.
    
 0.614
LOC107570993
Catenin beta-1 isoform X1.
    
 0.614
LOC107562072
Junction plakoglobin-like isoform X1.
    
 0.614
ENSSGRP00000067405
Catenin beta-1-like.
    
 0.614
LOC107592060
Catenin beta-1-like.
    
 0.614
LOC107563614
Junction plakoglobin-like.
    
 0.614
ENSSGRP00000105239
Junction plakoglobin b.
    
 0.614
LOC107600481
Four-jointed box protein 1-like.
   
 0.587
ENSSGRP00000102828
Four-jointed box protein 1-like.
   
 0.587
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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