Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107581540Coiled-coil domain-containing protein 12-like. (163 aa)    
Predicted Functional Partners:
syf2
Pre-mRNA-splicing factor SYF2.
    
  0.986
ENSSGRP00000091073
SYF2 pre-mRNA-splicing factor.
    
  0.986
fam32a
Protein FAM32A.
   
 0.977
LOC107601502
pre-mRNA-splicing factor SLU7-like.
   
  0.971
CWF19L2
CWF19-like protein 2.
    
 0.969
ENSSGRP00000038017
CWF19-like protein 2.
    
 0.969
cdc40
Cell division cycle 40.
    
  0.968
ENSSGRP00000013227
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.968
LOC107584443
Peptidyl-prolyl cis-trans isomerase-like 1.
   
  0.966
ppil1
Peptidyl-prolyl cis-trans isomerase-like 1 isoform X1.
   
  0.966
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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