Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107548877Ribosomal protein S6 kinase beta-1-like. (537 aa)    
Predicted Functional Partners:
LOC107594963
Serine/threonine-protein kinase mTOR-like.
    
 0.964
LOC107564227
Serine/threonine-protein kinase mTOR.
    
 0.964
LOC107553319
Regulatory-associated protein of mTOR-like isoform X1.
    
 0.959
rptor
Regulatory-associated protein of mTOR isoform X1.
    
 0.959
LOC107577586
Uncharacterized protein LOC107577586.
   
 0.921
ENSSGRP00000022625
Uncharacterized protein LOC107551160.
   
 0.921
LOC107603014
Small subunit ribosomal protein S6e.
    
 0.917
ENSSGRP00000059789
annotation not available
    
 0.917
LOC107551827
40S ribosomal protein S6.
    
 0.917
mlst8
Target of rapamycin complex subunit LST8.
    
 0.914
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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