STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010065annotation not available (301 aa)    
Predicted Functional Partners:
Kdm8
LOW QUALITY PROTEIN: lysine-specific demethylase 8.
    
 
 0.803
LOC107564696
Lysine-specific demethylase 8.
    
 
 0.803
ND4
NADH-ubiquinone oxidoreductase chain 4.
    
 
 0.657
ENSSGRP00000071237
annotation not available
   
 
 0.642
ENSSGRP00000089838
WDFY family member 4.
   
 
 0.642
ENSSGRP00000018819
annotation not available
   
 0.614
ENSSGRP00000021295
annotation not available
   
 0.614
ENSSGRP00000047719
E3 SUMO-protein ligase RanBP2-like.
   
 0.614
ENSSGRP00000047756
E3 SUMO-protein ligase RanBP2-like.
   
 0.614
ENSSGRP00000067162
annotation not available
   
 0.614
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.