Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107579195Peptidoglycan-recognition protein SC2-like. (143 aa)    
Predicted Functional Partners:
ENSSGRP00000111213
annotation not available
  
 
 0.731
ENSSGRP00000066730
LOW QUALITY PROTEIN: N-acetylmuramoyl-L-alanine amidase-like.
   
 
 0.641
ENSSGRP00000079161
annotation not available
   
 
 0.641
LOC107566578
Splicing factor, arginine/serine-rich 17.
      
 0.623
ENSSGRP00000007386
MIT, microtubule interacting and transport, domain containing 1.
      
 0.573
Mitd1
LOW QUALITY PROTEIN: MIT domain-containing protein 1.
      
 0.573
ENSSGRP00000107014
annotation not available
     
 0.543
LOC107556664
Putative protein MSS51 homolog, mitochondrial.
      
 0.488
ENSSGRP00000091227
acyl-CoA synthetase medium chain family member 3.
      
 0.488
ENSSGRP00000092795
acyl-CoA synthetase medium chain family member 3.
      
 0.488
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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