Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000010215Peptidyl-tRNA hydrolase 2, mitochondrial-like. (177 aa)    
Predicted Functional Partners:
ENSSGRP00000005300
annotation not available
   
 
 0.811
ENSSGRP00000027120
Cytochrome c oxidase assembly homolog 15 (yeast).
     
 0.733
ENSSGRP00000000964
Uncharacterized protein KIAA1107-like.
      
 0.724
LOC107562024
Cytochrome c oxidase assembly factor 3 homolog, mitochondrial.
   
 0.723
ENSSGRP00000028702
Nucleosome-remodeling factor subunit BPTF-like isoform X1.
      
 0.680
LOC107602285
Nucleosome-remodeling factor subunit BPTF-like.
      
 0.680
USP30
Ubiquitin carboxyl-terminal hydrolase 30-like.
    
 0.675
USP30-2
Ubiquitin specific peptidase 30.
    
 0.675
LOC107572180
Cytochrome c oxidase assembly protein subunit 19.
   
 
 0.674
LOC107582950
Cytochrome c oxidase assembly factor 3 homolog, mitochondrial-like.
   
 0.646
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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