STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010215Peptidyl-tRNA hydrolase 2, mitochondrial-like. (177 aa)    
Predicted Functional Partners:
USP30
Ubiquitin carboxyl-terminal hydrolase 30-like.
    
  0.648
USP30-2
Ubiquitin specific peptidase 30.
    
  0.648
ENSSGRP00000000964
Uncharacterized protein KIAA1107-like.
      
 0.641
ENSSGRP00000028702
Nucleosome-remodeling factor subunit BPTF-like isoform X1.
      
 0.625
LOC107602285
Nucleosome-remodeling factor subunit BPTF-like.
      
 0.625
LOC107586346
SET domain-containing protein 5-like isoform X1.
      
 0.584
LOC107562885
SET domain-containing protein 5-like.
      
 0.584
ENSSGRP00000012167
Uncharacterized protein LOC107562362.
      
 0.581
LOC107574490
Mitochondrial import receptor subunit TOM70-like.
     
 0.554
ENSSGRP00000032553
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.554
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.