Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010219Calphotin-like. (620 aa)    
Predicted Functional Partners:
ENSSGRP00000006060
annotation not available
   
 0.961
LOC107601794
Vinculin-like.
   
 0.961
ENSSGRP00000049665
Vinculin-like.
   
 0.961
Ilk
Integrin-linked protein kinase.
   
 0.961
ENSSGRP00000087559
Integrin-linked kinase.
   
 0.961
ENSSGRP00000071641
Parvin, alpha a.
   
 0.960
ENSSGRP00000072252
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.941
LOC107548582
ARF GTPase-activating protein GIT1-like isoform X1.
    
 0.941
LOC107585573
Adapter molecule crk-like.
    
 0.933
LOC107592606
Adapter molecule crk-like.
    
 0.933
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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