Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558128Annexin A4-like. (321 aa)    
Predicted Functional Partners:
LOC107589481
Protein S100-A1-like.
   
 0.635
LOC107589504
Protein S100-A1-like.
   
 0.635
ENSSGRP00000070905
Dysferlin-like.
   
 
 0.562
ENSSGRP00000084704
Dysferlin-like.
   
 
 0.562
ENSSGRP00000011528
WD repeat domain 90.
   
   0.525
ENSSGRP00000089112
annotation not available
    
 
 0.514
LOC107582074
Protein S100-A1-like.
   
 0.505
ENSSGRP00000093460
Plasminogen activator inhibitor 1 RNA-binding protein-like.
    
  0.495
ENSSGRP00000004263
Si:ch211-248e11.2.
    
   0.474
LOC107592842
Mesencephalic astrocyte-derived neurotrophic factor-like.
     
  0.474
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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