Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAP1Ubiquitin carboxyl-terminal hydrolase BAP1. (695 aa)    
Predicted Functional Partners:
ENSSGRP00000009681
ASXL transcriptional regulator 2.
   
 0.988
asxl2
Putative Polycomb group protein ASXL2 isoform X1.
   
 0.988
KDM1B
Lysine demethylase 1B.
   
 0.972
ENSSGRP00000040456
Putative Polycomb group protein ASXL1 isoform X1.
   
 0.964
LOC107586510
Putative Polycomb group protein ASXL1 isoform X1.
   
 0.964
ENSSGRP00000030630
BRCA1-associated RING domain protein 1-like.
    
 0.955
ENSSGRP00000091406
annotation not available
    
 0.955
LOC107567359
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like.
    
 0.953
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.953
LOC107565104
26S proteasome non-ATPase regulatory subunit 8-like.
   
 0.943
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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