STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010254Homeobox protein Hox-D10a-like. (323 aa)    
Predicted Functional Partners:
LOC107600753
Homeobox protein Hox-D9a-like.
   
  
0.743
LOC107588260
Homeobox protein HoxB/C/D9.
   
  
0.743
LOC107585088
Homeobox protein Hox-B7a-like.
   
 
0.553
LOC107582958
Homeobox protein Hox-B7a.
   
 
0.553
ENSSGRP00000095879
Inter-alpha-trypsin inhibitor heavy chain H5-like.
      
 0.506
ENSSGRP00000036877
Homeobox protein Hox-A10b-like.
  
 
0.485
LOC107550811
Homeobox protein Hox-A10b isoform X1.
   
 
0.482
ENSSGRP00000077819
Homeobox protein Hox-D13a-like.
   
  
0.469
ENSSGRP00000098425
annotation not available
   
  
 0.469
LOC107549415
Homeobox protein Mohawk-like.
    
 
 0.450
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.