Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010254Homeobox protein Hox-D10a-like. (323 aa)    
Predicted Functional Partners:
ENSSGRP00000009463
Homeobox protein Hox-A9a-like.
   
  
 0.791
LOC107602373
Homeobox protein Hox-A9a-like.
   
  
 0.791
LOC107600753
Homeobox protein Hox-D9a-like.
   
  
 0.707
LOC107588260
Homeobox protein HoxB/C/D9.
   
  
 0.707
ENSSGRP00000095879
Inter-alpha-trypsin inhibitor heavy chain H5-like.
      
 0.584
LOC107549415
Homeobox protein Mohawk-like.
    
 
 0.562
LOC107584376
Homeobox protein Mohawk-like.
    
 
 0.562
LOC107602374
Homeobox protein Hox-A5a-like.
    
   0.538
LOC107592096
Homeobox protein Hox-A5a isoform X1.
    
   0.538
LOC107592953
T-box transcription factor TBX20.
    
 
 0.532
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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