Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC107587763Protein dopey-1-like isoform X1. (2483 aa)    
Predicted Functional Partners:
ENSSGRP00000005035
annotation not available
   
 
 0.831
ENSSGRP00000013545
Protein MON2 homolog.
   
 
 0.831
ENSSGRP00000056582
Protein MON2 homolog.
   
 
 0.831
SLC66A2
Solute carrier family 66 member 2.
    
 
 0.687
LOC107553994
PQ-loop repeat-containing protein 1-like.
    
 
 0.687
ENSSGRP00000084093
PQ-loop repeat-containing protein 1-like.
    
 
 0.687
ENSSGRP00000104829
annotation not available
    
 
 0.687
ENSSGRP00000012262
Endoplasmin-like.
    
   0.666
ENSSGRP00000016144
Heat shock protein 90kDa beta.
    
   0.666
LOC107592208
Heat shock protein 90kDa beta.
    
   0.666
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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