STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010276E3 ubiquitin-protein ligase RNF182-like. (247 aa)    
Predicted Functional Partners:
LOC107597474
OCIA domain-containing protein 2-like.
      
 0.635
GID4
Glucose-induced degradation protein 4 homolog.
      
 0.591
GID4-2
Glucose-induced degradation protein 4 homolog isoform X1.
      
 0.591
LOC107579531
RING finger protein 223-like.
      
0.521
ENSSGRP00000056182
TBC1 domain family member 30-like.
      
 0.493
ENSSGRP00000088039
TBC1 domain family, member 30.
      
 0.493
ENSSGRP00000091803
annotation not available
      
 0.487
limd2
LIM domain-containing protein 2.
      
 0.448
LOC107597445
OCIA domain-containing protein 1-like.
      
 0.446
LOC107567413
E3 ubiquitin-protein ligase rnf152-like.
      
0.424
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.