ENSSGRP00000010282 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSGRP00000010282

annotation not available (1016 aa)

Predicted Functional Partners:

ENSSGRP00000068033

0.979

ENSSGRP00000072118

0.979

RIMS2

0.979

RIMS2-2

0.979

LOC107598211

0.784

ENSSGRP00000037391

0.784

RIMS1

0.784

ENSSGRP00000053983

0.784

RIMS1-2

0.784

ENSSGRP00000085860

0.784

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000010282	ENSSGRP00000037391	ENSSGRP00000010282	ENSSGRP00000037391	annotation not available	Regulating synaptic membrane exocytosis protein 3-like.	0.784
ENSSGRP00000010282	ENSSGRP00000053983	ENSSGRP00000010282	ENSSGRP00000053983	annotation not available	Regulating synaptic membrane exocytosis protein 1-like.	0.784
ENSSGRP00000010282	ENSSGRP00000068033	ENSSGRP00000010282	ENSSGRP00000068033	annotation not available	annotation not available	0.979
ENSSGRP00000010282	ENSSGRP00000072118	ENSSGRP00000010282	ENSSGRP00000072118	annotation not available	annotation not available	0.979
ENSSGRP00000010282	ENSSGRP00000085860	ENSSGRP00000010282	ENSSGRP00000085860	annotation not available	Regulating synaptic membrane exocytosis 1a.	0.784
ENSSGRP00000010282	LOC107598211	ENSSGRP00000010282	ENSSGRP00000015751	annotation not available	Regulating synaptic membrane exocytosis protein 3-like.	0.784
ENSSGRP00000010282	RIMS1	ENSSGRP00000010282	ENSSGRP00000046334	annotation not available	Regulating synaptic membrane exocytosis 1.	0.784
ENSSGRP00000010282	RIMS1-2	ENSSGRP00000010282	ENSSGRP00000064244	annotation not available	Regulating synaptic membrane exocytosis 1.	0.784
ENSSGRP00000010282	RIMS2	ENSSGRP00000010282	ENSSGRP00000096194	annotation not available	Regulating synaptic membrane exocytosis protein 2-like.	0.979
ENSSGRP00000010282	RIMS2-2	ENSSGRP00000010282	ENSSGRP00000106360	annotation not available	Regulating synaptic membrane exocytosis protein 2-like.	0.979
ENSSGRP00000037391	ENSSGRP00000010282	ENSSGRP00000037391	ENSSGRP00000010282	Regulating synaptic membrane exocytosis protein 3-like.	annotation not available	0.784
ENSSGRP00000037391	RIMS2	ENSSGRP00000037391	ENSSGRP00000096194	Regulating synaptic membrane exocytosis protein 3-like.	Regulating synaptic membrane exocytosis protein 2-like.	0.406
ENSSGRP00000037391	RIMS2-2	ENSSGRP00000037391	ENSSGRP00000106360	Regulating synaptic membrane exocytosis protein 3-like.	Regulating synaptic membrane exocytosis protein 2-like.	0.406
ENSSGRP00000053983	ENSSGRP00000010282	ENSSGRP00000053983	ENSSGRP00000010282	Regulating synaptic membrane exocytosis protein 1-like.	annotation not available	0.784
ENSSGRP00000068033	ENSSGRP00000010282	ENSSGRP00000068033	ENSSGRP00000010282	annotation not available	annotation not available	0.979
ENSSGRP00000068033	ENSSGRP00000072118	ENSSGRP00000068033	ENSSGRP00000072118	annotation not available	annotation not available	0.654
ENSSGRP00000068033	RIMS2	ENSSGRP00000068033	ENSSGRP00000096194	annotation not available	Regulating synaptic membrane exocytosis protein 2-like.	0.654
ENSSGRP00000068033	RIMS2-2	ENSSGRP00000068033	ENSSGRP00000106360	annotation not available	Regulating synaptic membrane exocytosis protein 2-like.	0.654
ENSSGRP00000072118	ENSSGRP00000010282	ENSSGRP00000072118	ENSSGRP00000010282	annotation not available	annotation not available	0.979
ENSSGRP00000072118	ENSSGRP00000068033	ENSSGRP00000072118	ENSSGRP00000068033	annotation not available	annotation not available	0.654