Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSGRP00000010293Dynein, axonemal, intermediate chain 1, paralog 2. (409 aa)    
Predicted Functional Partners:
LOC107597116
Axonemal dynein light intermediate polypeptide 1-like.
  
 0.972
LOC107587750
Axonemal dynein light intermediate polypeptide 1-like.
  
 0.972
ENSSGRP00000015548
Dynein intermediate chain 3, ciliary-like.
   
0.957
Dnai2
Dynein intermediate chain 2, axonemal.
   
0.957
DNAI2
Dynein intermediate chain 2, axonemal-like.
   
 0.957
dnal1
Dynein light chain 1, axonemal.
   
 0.953
ENSSGRP00000061169
Radial spoke head protein 6 homolog A-like.
  
 
 0.944
LOC107595477
Radial spoke head protein 6 homolog A-like.
   
 
 0.932
ENSSGRP00000037180
annotation not available
   
 
 0.918
WDR63
WD repeat domain 63.
   
 0.917
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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