Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010316GATA-binding factor 2-like. (91 aa)    
Predicted Functional Partners:
LOC107565723
T-box brain protein 1-like.
    
 0.902
LOC107563776
T-box brain protein 1-like isoform X1.
    
 0.902
zfpm1
Zinc finger protein ZFPM1.
    
 0.862
ENSSGRP00000062805
Zinc finger protein ZFPM1-like.
    
 0.862
ENSSGRP00000005880
T-cell acute lymphocytic leukemia protein 1 homolog.
   
 0.842
ENSSGRP00000071108
T-cell acute lymphocytic leukemia 1.
   
 0.842
LOC107554898
Transcription factor PU.1-like isoform X1.
    
 0.797
ENSSGRP00000068306
Transcription factor PU.1-like.
    
 0.797
glrx3
Glutaredoxin-3.
    
 
 0.783
LOC107553692
Glutaredoxin 3-like isoform X1.
    
 
 0.783
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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