Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010317Arginine-glutamic acid dipeptide (RE) repeats a. (1551 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5.
    
 
 0.852
ENSSGRP00000061058
Nuclear receptor subfamily 2, group E, member 1.
    
 0.794
ENSSGRP00000078055
Nuclear receptor subfamily 2 group E member 1-like.
    
 0.794
LOC107595245
Nuclear receptor subfamily 2 group E member 3.
    
 0.791
LOC107589312
Nuclear receptor subfamily 2 group E member 3.
    
 0.791
ENSSGRP00000006703
Protocadherin Fat 1-like.
    
 0.661
ENSSGRP00000017506
annotation not available
    
 
 0.661
ENSSGRP00000024989
Protocadherin Fat 1-like.
    
 0.661
LOC107562748
Protocadherin Fat 1-like isoform X1.
    
 0.661
ENSSGRP00000009236
Protocadherin Fat 3-like.
    
 0.637
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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