ENSSGRP00000010339 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000010339

annotation not available (542 aa)

Predicted Functional Partners:

ENSSGRP00000015351

0.854

ENSSGRP00000057431

0.846

LOC107556222

0.846

LOC107596000

0.843

ENSSGRP00000042841

0.843

LOC107552871

0.810

LOC107558284

0.805

ENSSGRP00000057499

0.805

LOC107586405

0.805

LOC107600186

0.805

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000010339	ENSSGRP00000015351	ENSSGRP00000010339	ENSSGRP00000015351	annotation not available	Guanine nucleotide-binding protein subunit alpha-14-like.	0.854
ENSSGRP00000010339	ENSSGRP00000042841	ENSSGRP00000010339	ENSSGRP00000042841	annotation not available	Guanine nucleotide-binding protein G(q) subunit alpha-like.	0.843
ENSSGRP00000010339	ENSSGRP00000057431	ENSSGRP00000010339	ENSSGRP00000057431	annotation not available	Guanine nucleotide binding protein (G protein), alpha 14a.	0.846
ENSSGRP00000010339	ENSSGRP00000057499	ENSSGRP00000010339	ENSSGRP00000057499	annotation not available	annotation not available	0.805
ENSSGRP00000010339	LOC107552871	ENSSGRP00000010339	ENSSGRP00000035752	annotation not available	B2 bradykinin receptor-like.	0.810
ENSSGRP00000010339	LOC107556222	ENSSGRP00000010339	ENSSGRP00000089174	annotation not available	Guanine nucleotide-binding protein subunit alpha-14-like.	0.846
ENSSGRP00000010339	LOC107558284	ENSSGRP00000010339	ENSSGRP00000044269	annotation not available	Guanine nucleotide-binding protein subunit alpha-11.	0.805
ENSSGRP00000010339	LOC107586405	ENSSGRP00000010339	ENSSGRP00000062853	annotation not available	Guanine nucleotide-binding protein subunit alpha-11-like isoform X1.	0.805
ENSSGRP00000010339	LOC107596000	ENSSGRP00000010339	ENSSGRP00000015382	annotation not available	Guanine nucleotide-binding protein G(q) subunit alpha.	0.843
ENSSGRP00000010339	LOC107600186	ENSSGRP00000010339	ENSSGRP00000101632	annotation not available	Guanine nucleotide-binding protein subunit alpha-11-like isoform X1.	0.805
ENSSGRP00000015351	ENSSGRP00000010339	ENSSGRP00000015351	ENSSGRP00000010339	Guanine nucleotide-binding protein subunit alpha-14-like.	annotation not available	0.854
ENSSGRP00000015351	ENSSGRP00000042841	ENSSGRP00000015351	ENSSGRP00000042841	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein G(q) subunit alpha-like.	0.956
ENSSGRP00000015351	ENSSGRP00000057431	ENSSGRP00000015351	ENSSGRP00000057431	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide binding protein (G protein), alpha 14a.	0.888
ENSSGRP00000015351	ENSSGRP00000057499	ENSSGRP00000015351	ENSSGRP00000057499	Guanine nucleotide-binding protein subunit alpha-14-like.	annotation not available	0.761
ENSSGRP00000015351	LOC107552871	ENSSGRP00000015351	ENSSGRP00000035752	Guanine nucleotide-binding protein subunit alpha-14-like.	B2 bradykinin receptor-like.	0.978
ENSSGRP00000015351	LOC107556222	ENSSGRP00000015351	ENSSGRP00000089174	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-14-like.	0.887
ENSSGRP00000015351	LOC107558284	ENSSGRP00000015351	ENSSGRP00000044269	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-11.	0.887
ENSSGRP00000015351	LOC107586405	ENSSGRP00000015351	ENSSGRP00000062853	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-11-like isoform X1.	0.887
ENSSGRP00000015351	LOC107596000	ENSSGRP00000015351	ENSSGRP00000015382	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein G(q) subunit alpha.	0.955
ENSSGRP00000015351	LOC107600186	ENSSGRP00000015351	ENSSGRP00000101632	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-11-like isoform X1.	0.887