Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010349annotation not available (89 aa)    
Predicted Functional Partners:
LOC107570559
Ankyrin repeat domain-containing protein 33B-like.
      
 0.680
ENSSGRP00000063122
Ankyrin repeat domain 33Ab.
      
 0.680
LOC107563641
Ankyrin repeat domain-containing protein 33B-like.
      
 0.680
ENSSGRP00000108707
Ankyrin repeat domain-containing protein 33B-like.
      
 0.680
ENSSGRP00000050318
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
      
 0.665
lrit2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
      
 0.665
ENSSGRP00000003387
annotation not available
      
 0.627
ENSSGRP00000044508
WD repeat domain 17.
      
 0.627
Wdr17
WD repeat-containing protein 17.
      
 0.627
LOC107596661
Potassium inwardly-rectifying channel subfamily J member 14.
      
 0.602
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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