Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000010358Voltage-dependent L-type calcium channel subunit beta-4-like. (186 aa)    
Predicted Functional Partners:
ENSSGRP00000078963
Calcium channel, voltage-dependent, alpha 2/delta subunit 1a.
   
 0.885
ENSSGRP00000029635
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.862
ENSSGRP00000026026
annotation not available
    
  0.819
ENSSGRP00000103194
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.819
Rasgrf1
Ras-specific guanine nucleotide-releasing factor 1.
     
 0.776
ENSSGRP00000089791
annotation not available
     
 0.776
Rasgrp3
RAS guanyl-releasing protein 3.
     
  0.762
ENSSGRP00000003463
RAS guanyl releasing protein 3 (calcium and DAG-regulated).
     
  0.762
LOC107588330
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like.
   
 
  0.762
LOC107562984
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like isoform X1.
   
 
  0.762
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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