ENSSGRP00000010366 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSGRP00000010366

annotation not available (142 aa)

Predicted Functional Partners:

DNAJA4

0.763

LOC107603013

0.763

DNAJA4-2

0.763

LOC107551804

0.763

ENSSGRP00000004099

0.729

ENSSGRP00000040819

0.708

Tfip11

0.708

LOC107589629

0.691

LOC107599071

0.691

SNAP25

0.691

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJA4	ENSSGRP00000004099	ENSSGRP00000039854	ENSSGRP00000004099	DnaJ homolog subfamily A member 4-like.	annotation not available	0.839
DNAJA4	ENSSGRP00000010366	ENSSGRP00000039854	ENSSGRP00000010366	DnaJ homolog subfamily A member 4-like.	annotation not available	0.763
DNAJA4-2	ENSSGRP00000004099	ENSSGRP00000074611	ENSSGRP00000004099	DnaJ homolog subfamily A member 4-like.	annotation not available	0.839
DNAJA4-2	ENSSGRP00000010366	ENSSGRP00000074611	ENSSGRP00000010366	DnaJ homolog subfamily A member 4-like.	annotation not available	0.763
ENSSGRP00000004099	DNAJA4	ENSSGRP00000004099	ENSSGRP00000039854	annotation not available	DnaJ homolog subfamily A member 4-like.	0.839
ENSSGRP00000004099	DNAJA4-2	ENSSGRP00000004099	ENSSGRP00000074611	annotation not available	DnaJ homolog subfamily A member 4-like.	0.839
ENSSGRP00000004099	ENSSGRP00000010366	ENSSGRP00000004099	ENSSGRP00000010366	annotation not available	annotation not available	0.729
ENSSGRP00000004099	LOC107551804	ENSSGRP00000004099	ENSSGRP00000078016	annotation not available	DnaJ homolog subfamily A member 1-like.	0.839
ENSSGRP00000004099	LOC107603013	ENSSGRP00000004099	ENSSGRP00000048923	annotation not available	DnaJ homolog subfamily A member 1-like.	0.839
ENSSGRP00000010366	DNAJA4	ENSSGRP00000010366	ENSSGRP00000039854	annotation not available	DnaJ homolog subfamily A member 4-like.	0.763
ENSSGRP00000010366	DNAJA4-2	ENSSGRP00000010366	ENSSGRP00000074611	annotation not available	DnaJ homolog subfamily A member 4-like.	0.763
ENSSGRP00000010366	ENSSGRP00000004099	ENSSGRP00000010366	ENSSGRP00000004099	annotation not available	annotation not available	0.729
ENSSGRP00000010366	ENSSGRP00000040819	ENSSGRP00000010366	ENSSGRP00000040819	annotation not available	Tuftelin interacting protein 11.	0.708
ENSSGRP00000010366	LOC107551804	ENSSGRP00000010366	ENSSGRP00000078016	annotation not available	DnaJ homolog subfamily A member 1-like.	0.763
ENSSGRP00000010366	LOC107589629	ENSSGRP00000010366	ENSSGRP00000062098	annotation not available	Synaptosomal-associated protein 25-B.	0.691
ENSSGRP00000010366	LOC107599071	ENSSGRP00000010366	ENSSGRP00000067586	annotation not available	Synaptosomal-associated protein 25-A.	0.691
ENSSGRP00000010366	LOC107603013	ENSSGRP00000010366	ENSSGRP00000048923	annotation not available	DnaJ homolog subfamily A member 1-like.	0.763
ENSSGRP00000010366	SNAP25	ENSSGRP00000010366	ENSSGRP00000082108	annotation not available	Synaptosome associated protein 25.	0.691
ENSSGRP00000010366	Tfip11	ENSSGRP00000010366	ENSSGRP00000066034	annotation not available	Tuftelin-interacting protein 11 isoform X1.	0.708
ENSSGRP00000040819	ENSSGRP00000010366	ENSSGRP00000040819	ENSSGRP00000010366	Tuftelin interacting protein 11.	annotation not available	0.708