STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107586721THAP domain-containing protein 4-like. (169 aa)    
Predicted Functional Partners:
LOC107550081
Uncharacterized protein LOC107550081.
   
  
 0.668
ENSSGRP00000104903
Uncharacterized protein LOC107563930.
   
  
 0.668
LOC107570956
THAP domain-containing protein 3-like isoform X1.
      
 0.652
ENSSGRP00000043690
annotation not available
      
 0.606
ENSSGRP00000078805
annotation not available
      
 0.606
LOC107552279
Thymidylate kinase-like.
      
 0.495
LOC107584524
Dual specificity testis-specific protein kinase 2-like isoform X1.
      
 0.495
LOC107593168
Thymidylate kinase-like.
      
 0.495
LOC107586270
52 kDa repressor of the inhibitor of the protein kinase-like.
      
 0.456
LOC107577326
52 kDa repressor of the inhibitor of the protein kinase-like.
      
 0.456
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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