Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ELAC1elaC ribonuclease Z 1. (191 aa)    
Predicted Functional Partners:
LOC107593010
Ankyrin repeat and zinc finger domain-containing protein 1-like.
   
  
 0.753
ENSSGRP00000110290
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
  
 0.753
LOC107570385
MFS transporter, PCFT/HCP family, solute carrier family 46 (thymic stromal cotransporter), member 2.
      
 0.706
ENSSGRP00000077214
MFS transporter, PCFT/HCP family, solute carrier family 46 (thymic stromal cotransporter), member 2.
      
 0.706
ENSSGRP00000019648
LOW QUALITY PROTEIN: tubulin-specific chaperone E-like.
      
 0.704
ENSSGRP00000044838
Tubulin folding cofactor E.
      
 0.704
Polr3a
LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1.
   
 
 0.693
ENSSGRP00000041850
Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae).
  
 
 0.648
ENSSGRP00000036815
Nucleosome assembly protein 1-like 4.
   
   0.643
nap1l4
Nucleosome assembly protein 1-like 4 isoform X1.
   
   0.643
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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