Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000010401Deoxynucleotidyltransferase terminal-interacting protein 2-like isoform X1. (205 aa)    
Predicted Functional Partners:
utp11
Probable U3 small nucleolar RNA-associated protein 11.
   
 
 0.988
ENSSGRP00000013069
UTP3 small subunit processome component.
   
 
 0.985
utp18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 
 0.973
LOC107595077
U3 small nucleolar ribonucleoprotein protein MPP10-like.
   
 
 0.970
LOC107585992
U3 small nucleolar ribonucleoprotein protein MPP10-like isoform X1.
   
 
 0.970
ENSSGRP00000085426
FCF1 rRNA-processing protein.
   
 
 0.968
fcf1
U3 small nucleolar RNA-associated protein 24.
   
 
 0.968
ENSSGRP00000031624
UTP6 small subunit processome component.
   
 
 0.967
utp6
U3 small nucleolar RNA-associated protein 6 homolog isoform X1.
   
 
 0.967
ENSSGRP00000041844
Protein AATF-like isoform X1.
   
 
 0.965
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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