Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107603279Cytosolic carboxypeptidase protein 6. (548 aa)    
Predicted Functional Partners:
LOC107593000
Tubulin polyglutamylase TTLL4-like isoform X1.
    
 
 0.715
ENSSGRP00000079806
annotation not available
      
 0.560
etv6
Transcription factor ETV6 isoform X1.
      
 0.560
LOC107555617
Protein FAM84A-like.
      
 0.541
LOC107601338
Protein FAM84A-like.
      
 0.541
LOC107601215
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 16.
      
 0.536
LOC107602826
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 16.
      
 0.536
ENSSGRP00000085856
Tubulin--tyrosine ligase-like protein 12.
      
 0.521
ENSSGRP00000089842
Tubulin polyglutamylase TTLL5-like.
    
 
 0.516
ttll5
Tubulin polyglutamylase TTLL5 isoform X1.
    
 
 0.516
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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