STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010414annotation not available (212 aa)    
Predicted Functional Partners:
Exosc2
Exosome complex component RRP4.
   
 0.944
ENSSGRP00000049016
Exosome component 1.
   
 0.898
LOC107594272
Exosome complex component CSL4-like.
   
 0.898
ENSSGRP00000002799
Exosome complex component RRP42-like.
   
 0.896
exosc7
Exosome complex component RRP42.
   
 0.896
LOC107571110
Superkiller viralicidic activity 2-like 2 isoform X1.
   
 0.892
ENSSGRP00000052492
Mtr4 exosome RNA helicase.
   
 0.892
exosc9
Exosome complex component RRP45.
   
 0.891
LOC107591532
Exosome complex component RRP45-like.
   
 0.891
ENSSGRP00000045755
Exosome complex component RRP43-like.
   
 0.886
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.