STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010424Splicing factor 3B subunit 3-like. (332 aa)    
Predicted Functional Partners:
ENSSGRP00000000245
Splicing factor 3a, subunit 2.
   
 0.980
ENSSGRP00000066673
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.972
LOC107552928
Splicing factor 3B subunit 5.
   
 0.970
LOC107552928-2
Splicing factor 3B subunit 5.
   
 0.970
LOC107569635
Splicing factor 3B subunit 1 isoform X1.
   
 0.969
LOC107595847
Splicing factor 3B subunit 1-like isoform X1.
   
 0.969
ENSSGRP00000002006
Splicing factor 3B subunit 4.
   
 0.967
LOC107559677
Splicing factor 3B subunit 4-like.
   
 0.967
SF3B2
Splicing factor 3b subunit 2.
   
 0.967
ENSSGRP00000025646
Splicing factor 3b, subunit 2.
   
 0.967
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.