Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010430Rho GTPase-activating protein 22/24/25. (500 aa)    
Predicted Functional Partners:
ENSSGRP00000004211
annotation not available
    
 0.627
cdc42
Cell division control protein 42 homolog isoform X1.
    
 0.627
ENSSGRP00000079890
Cell division control protein 42 homolog isoform X1.
    
 0.627
INF2
Inverted formin-2 isoform X1.
      
 0.567
ENSSGRP00000036184
KN motif and ankyrin repeat domain-containing protein 2-like.
      
 0.535
ENSSGRP00000087439
KN motif and ankyrin repeat domain-containing protein 2-like.
      
 0.535
LOC107580157
Cdc42 homolog.
    
 0.522
LOC107552852
Cell division control protein 42 homolog isoform X1.
    
 0.522
ENSSGRP00000087442
annotation not available
      
 0.463
LOC107601953
DCN1-like protein 4 isoform X1.
      
 0.456
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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