Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107577437Zinc finger and BTB domain-containing protein 11-like. (265 aa)    
Predicted Functional Partners:
RPF1
Ribosome production factor 1.
    
   0.771
ENSSGRP00000100769
Ribosome production factor 1-like.
    
   0.771
ENSSGRP00000101922
Zinc finger CCHC-type and RNA binding motif 1.
    
   0.733
LOC107568604
Tissue factor pathway inhibitor.
      
 0.539
RPL26
Large subunit ribosomal protein L26e.
    
   0.529
LOC107551170
Large subunit ribosomal protein L3e.
    
   0.529
ENSSGRP00000026385
Ribosomal protein L3.
    
   0.529
LOC107570282
Large subunit ribosomal protein L10e.
    
   0.529
ENSSGRP00000047297
Ribosomal protein L10.
    
   0.529
LOC107587121
Large subunit ribosomal protein L26e.
    
   0.529
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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