STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gcat2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial. (220 aa)    
Predicted Functional Partners:
LOC107583601
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.964
LOC107582959
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.964
LOC107594144
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.964
LOC107561940
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.963
LOC107589050
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.963
ENSSGRP00000112788
L-threonine 3-dehydrogenase, mitochondrial-like.
 
 
 0.963
LOC107581676
Probable low-specificity L-threonine aldolase 2.
  
 
 0.948
sardh
Sarcosine dehydrogenase, mitochondrial isoform X1.
  
 0.938
gldc
Glycine dehydrogenase (decarboxylating), mitochondrial.
  
 
 0.937
LOC107585700
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
    
 0.936
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.