Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010438annotation not available (229 aa)    
Predicted Functional Partners:
LOC107591335
Peroxisomal biogenesis factor 19-like.
    
 0.929
LOC107557446
Peroxisomal biogenesis factor 19-like.
    
 0.929
LOC107548713
Solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17.
     
  0.876
pex11g
Peroxisomal membrane protein 11C.
   
 0.822
pex13
Peroxisome biogenesis factor 13.
   
 
 0.808
ENSSGRP00000002333
Peroxisomal biogenesis factor 12.
     
 0.736
LOC107587685
Peroxisome assembly protein 12-like.
     
 0.736
LOC107554992
Peroxisomal membrane protein PEX16 isoform X1.
   
 
 0.718
ENSSGRP00000105060
annotation not available
   
 
 0.718
LOC107565080
Peroxisomal membrane protein PEX16-like.
   
 
 0.718
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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