Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010439annotation not available (615 aa)    
Predicted Functional Partners:
mrpl16
39S ribosomal protein L16, mitochondrial isoform X1.
   
 0.640
COX2
Cytochrome c oxidase subunit II.
   
  
 0.471
ATP6
F-type H+-transporting ATPase subunit a.
   
  
 0.425
Mrpl2
39S ribosomal protein L2, mitochondrial isoform X1.
   
 
 0.424
COX1
Cytochrome c oxidase subunit 1.
   
  
 0.422
COX3
Cytochrome c oxidase subunit III.
   
  
 0.406
Rpp38
Ribonucleases P/MRP protein subunit RPP38.
     
  0.400
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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