STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010440annotation not available (164 aa)    
Predicted Functional Partners:
LOC107560407
Serine palmitoyltransferase 1-like.
   
 0.909
ENSSGRP00000040954
Serine palmitoyltransferase 1-like.
   
 0.909
LOC107595113
Sorbitol dehydrogenase-like.
  
 
 0.742
ENSSGRP00000071968
Sorbitol dehydrogenase.
  
 
 0.742
ENSSGRP00000058295
Serine palmitoyltransferase, small subunit A.
    
 0.712
ENSSGRP00000098288
Serine palmitoyltransferase, small subunit A.
    
 0.712
ENSSGRP00000040141
Uncharacterized protein LOC107600573.
      
 0.637
kdsr
3-ketodihydrosphingosine reductase.
     
 0.636
ENSSGRP00000108446
3-ketodihydrosphingosine reductase-like.
     
 0.636
ENSSGRP00000034695
Serine palmitoyltransferase, small subunit B.
    
 0.618
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.