STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107599803Elongation of very long chain fatty acids protein 7-like. (288 aa)    
Predicted Functional Partners:
LOC107573907
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
   
 0.740
LOC107600455
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
   
 0.727
ENSSGRP00000102910
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
   
 0.727
acad11
Acyl-CoA dehydrogenase family member 11.
      
 0.518
LOC107551431
Acyl-CoA 6-desaturase (Delta-6 desaturase).
     
 0.413
LOC107561173
Fatty acid desaturase 2.
     
 0.413
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
   
 
  0.409
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.