Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010455Transmembrane channel-like protein 6. (372 aa)    
Predicted Functional Partners:
ENSSGRP00000023512
Helicase SKI2W-like.
    
 0.608
ENSSGRP00000015274
Kinetochore-associated protein 1-like.
      
 0.568
ENSSGRP00000041910
Ribonucleoprotein PTB-binding 2-like isoform X1.
    
 
 0.523
ENSSGRP00000040137
annotation not available
    
 
 0.521
efhb
EF-hand domain-containing family member B.
    
 
 0.521
dusp27
Inactive dual specificity phosphatase 27 isoform X1.
    
 0.467
ENSSGRP00000032778
annotation not available
      
 0.463
clrn3
Clarin-3.
     
 0.452
LOC107549339
Clarin-3-like.
     
 0.452
LOC107588970
Ras GTPase-activating protein 1-like.
    
 
 0.450
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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