STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010455Transmembrane channel-like protein 6. (372 aa)    
Predicted Functional Partners:
ENSSGRP00000023512
Helicase SKI2W-like.
    
 0.571
ENSSGRP00000040137
annotation not available
    
 
 0.509
efhb
EF-hand domain-containing family member B.
    
 
 0.509
ENSSGRP00000015274
Kinetochore-associated protein 1-like.
      
 0.491
ENSSGRP00000034836
RING finger protein 223-like.
   
 0.471
ENSSGRP00000041910
Ribonucleoprotein PTB-binding 2-like isoform X1.
    
 
 0.462
ENSSGRP00000011528
WD repeat domain 90.
   
 0.454
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
    
 0.451
ENSSGRP00000061731
AT rich interactive domain 4A (RBP1-like).
    
 0.451
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
    
 0.451
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.