Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000010460Transmembrane channel-like 8. (578 aa)    
Predicted Functional Partners:
scn3b
Voltage-gated sodium channel type III beta.
      
 0.585
LOC107586232
Sodium channel subunit beta-3-like isoform X1.
      
 0.585
ENSSGRP00000003263
annotation not available
   
 0.551
LOC107602965
Protein cornichon homolog 1.
    
 0.536
ENSSGRP00000102225
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.536
nop16
Nucleolar protein 16.
      
 0.509
ENSSGRP00000106869
NOP16 nucleolar protein homolog (yeast).
      
 0.509
ENSSGRP00000037235
Ras homolog, mTORC1 binding.
    
 0.503
rheb
Ras homolog enriched in brain.
    
 0.503
ENSSGRP00000033035
Protein tyrosine phosphatase receptor type Ub.
    
 0.493
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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