STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010460Transmembrane channel-like 8. (578 aa)    
Predicted Functional Partners:
LOC107602965
Protein cornichon homolog 1.
    
 0.524
ENSSGRP00000102225
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.524
ENSSGRP00000034836
RING finger protein 223-like.
   
 0.471
ENSSGRP00000003708
LHFPL tetraspan subfamily member 5b.
     
 0.458
ENSSGRP00000066165
Tetraspan membrane protein of hair cell stereocilia homolog.
     
 0.458
ENSSGRP00000011528
WD repeat domain 90.
   
 0.454
ENSSGRP00000011618
AT-rich interactive domain-containing protein 4A-like.
    
 0.451
ENSSGRP00000061731
AT rich interactive domain 4A (RBP1-like).
    
 0.451
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
    
 0.451
Arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.451
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.