STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107597124Inactive serine protease 35-like. (427 aa)    
Predicted Functional Partners:
LOC107571754
Pseudouridine-5'-phosphatase-like isoform X1.
      
 0.507
LOC107602763
Pseudouridine-5'-phosphatase-like.
      
 0.507
LOC107587763
Protein dopey-1-like isoform X1.
      
 0.502
LOC107587763-2
Protein dopey-1-like isoform X1.
      
 0.502
LOC107565202
Keratinocyte-associated protein 3-like.
     
 0.492
ENSSGRP00000100102
Transmembrane protein 54b.
     
 0.492
pnpla4
Patatin-like phospholipase domain-containing protein 4.
      
 0.416
ENSSGRP00000101909
Patatin-like phospholipase domain containing 4.
      
 0.416
ENSSGRP00000063662
Endonuclease, polyU-specific C.
      
 0.412
ENSSGRP00000082734
Poly(U)-specific endoribonuclease-C.
      
 0.412
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.