Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010479Arginine and glutamate-rich protein 1-A-like. (150 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap-binding protein subunit 2.
    
  0.740
LOC107569251
Nuclear cap-binding protein subunit 2-like.
    
  0.740
ENSSGRP00000000245
Splicing factor 3a, subunit 2.
    
   0.710
pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
  0.693
LOC107587767
Arginine/serine-rich protein PNISR-like isoform X1.
   
  0.693
MSL3
Male-specific lethal 3 homolog isoform X1.
    
 0.673
ENSSGRP00000017116
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 
 0.656
ENSSGRP00000056884
U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.
   
 
 0.656
LOC107548330
U1 small nuclear ribonucleoprotein 70 kDa-like.
   
 
 0.656
LOC107583035
U1 small nuclear ribonucleoprotein 70 kDa-like.
   
 
 0.656
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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