Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
LOC107564568Peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1. (794 aa)    
Predicted Functional Partners:
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.893
LOC107559132
Crooked neck-like protein 1.
   
 0.884
ENSSGRP00000054055
Crooked neck pre-mRNA splicing factor 1.
   
 0.884
ENSSGRP00000041114
XPA binding protein 2.
   
 0.881
xab2
Pre-mRNA-splicing factor SYF1 isoform X1.
   
 0.881
ENSSGRP00000020384
ISY1 splicing factor homolog.
   
 0.879
ENSSGRP00000069344
Pre-mRNA-splicing factor ISY1 homolog.
   
 0.879
SNW1
SNW domain-containing protein 1.
   
 0.865
ENSSGRP00000108934
SNW domain containing 1.
   
 0.865
ENSSGRP00000006872
annotation not available
   
 0.846
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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