STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010497annotation not available (68 aa)    
Predicted Functional Partners:
qtrt1
Queuine tRNA-ribosyltransferase.
     
 0.674
ciao2a
MIP18 family protein FAM96A.
      
 0.630
LOC107583201
Ribonuclease H2 subunit A-like.
   
    0.566
LOC107594406
Ribonuclease H2 subunit A-like.
   
    0.566
ENSSGRP00000040668
DNA primase subunit 1.
   
    0.506
prim1
DNA primase small subunit.
   
    0.506
Polr3a
LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1.
      
 0.453
ENSSGRP00000042626
DNA primase subunit 2.
   
    0.414
ENSSGRP00000104239
DNA primase large subunit-like.
   
    0.414
ENSSGRP00000104243
DNA primase large subunit-like.
   
    0.414
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.