Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564583WD repeat-containing protein 20-like. (572 aa)    
Predicted Functional Partners:
ENSSGRP00000006955
WD repeat-containing protein 48-like.
    
 0.894
ENSSGRP00000017192
WD repeat-containing protein 48-like.
    
 0.894
WDR48
WD repeat domain 48.
    
 0.894
Wdr48
WD repeat-containing protein 48.
    
 0.894
LOC107600221
WD repeat-containing protein 48 isoform X1.
    
 0.894
USP46
Ubiquitin specific peptidase 46.
   
 0.872
LOC107591222
Ubiquitin carboxyl-terminal hydrolase 12/46.
   
 0.872
LOC107597440
Ubiquitin carboxyl-terminal hydrolase 12/46.
   
 0.872
ENSSGRP00000092778
Ubiquitin carboxyl-terminal hydrolase 12/46.
   
 0.872
ENSSGRP00000109275
Ubiquitin specific peptidase 12b.
   
 0.872
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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