STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573462Retinoic acid receptor RXR-alpha-A isoform X1. (476 aa)    
Predicted Functional Partners:
LOC107563452
Oxysterols receptor LXR-alpha-like isoform X1.
   
0.915
LOC107553099
Oxysterols receptor LXR-alpha-like.
   
0.915
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
    
 0.828
ENSSGRP00000001585
Retinoic acid receptor alpha-A isoform X1.
   
0.797
LOC107570978
Bile acid receptor-like isoform X1.
   
0.797
ENSSGRP00000044854
Bile acid receptor-like isoform X1.
   
0.797
nr1h4
Farnesoid X receptor.
   
0.797
LOC107583817
Bile acid receptor-like.
   
0.797
LOC107596035
Nuclear receptor coactivator 2.
   
 0.788
ncoa1
Nuclear receptor coactivator 1 isoform X1.
   
 0.788
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.