STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010590annotation not available (200 aa)    
Predicted Functional Partners:
ENSSGRP00000017293
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
   
 0.932
polr1e
DNA-directed RNA polymerase I subunit RPA49.
     
 0.740
LOC107601284
RNA polymerase I-specific transcription initiation factor RRN3-like.
    
 0.681
LOC107590381
RNA polymerase I-specific transcription initiation factor RRN3-like.
    
 0.681
ENSSGRP00000075053
CD3e molecule, epsilon associated protein.
     
 0.669
LOC107552942
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.667
LOC107571264
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.667
TBPL1
TATA-box binding protein like 1.
    
 0.667
LOC107549057
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.667
ENSSGRP00000061694
TATA box binding protein like 2.
    
 0.667
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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