ENSSGRP00000010600 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000010600

annotation not available (2802 aa)

Predicted Functional Partners:

ENSSGRP00000083658

0.931

Dmxl2

0.930

LOC107601278

0.926

ENSSGRP00000104092

0.926

skp1

0.857

LOC107566902

0.855

ENSSGRP00000034524

0.854

Wdr7

0.854

Atp6v1h

0.792

ENSSGRP00000070730

0.792

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atp6v1h	Dmxl2	ENSSGRP00000040629	ENSSGRP00000039801	V-type proton ATPase subunit H isoform X1.	DmX-like protein 2.	0.792
Atp6v1h	ENSSGRP00000010600	ENSSGRP00000040629	ENSSGRP00000010600	V-type proton ATPase subunit H isoform X1.	annotation not available	0.792
Atp6v1h	ENSSGRP00000034524	ENSSGRP00000040629	ENSSGRP00000034524	V-type proton ATPase subunit H isoform X1.	WD repeat-containing protein 7-like.	0.819
Atp6v1h	ENSSGRP00000083658	ENSSGRP00000040629	ENSSGRP00000083658	V-type proton ATPase subunit H isoform X1.	Dmx-like 2.	0.792
Atp6v1h	ENSSGRP00000104092	ENSSGRP00000040629	ENSSGRP00000104092	V-type proton ATPase subunit H isoform X1.	Protein rogdi homolog.	0.814
Atp6v1h	LOC107566902	ENSSGRP00000040629	ENSSGRP00000029547	V-type proton ATPase subunit H isoform X1.	V-type H+-transporting ATPase subunit G.	0.997
Atp6v1h	LOC107601278	ENSSGRP00000040629	ENSSGRP00000070980	V-type proton ATPase subunit H isoform X1.	Protein rogdi homolog.	0.814
Atp6v1h	Wdr7	ENSSGRP00000040629	ENSSGRP00000048599	V-type proton ATPase subunit H isoform X1.	WD repeat-containing protein 7.	0.819
Atp6v1h	skp1	ENSSGRP00000040629	ENSSGRP00000086959	V-type proton ATPase subunit H isoform X1.	S-phase kinase-associated protein 1 isoform X1.	0.635
Dmxl2	Atp6v1h	ENSSGRP00000039801	ENSSGRP00000040629	DmX-like protein 2.	V-type proton ATPase subunit H isoform X1.	0.792
Dmxl2	ENSSGRP00000010600	ENSSGRP00000039801	ENSSGRP00000010600	DmX-like protein 2.	annotation not available	0.930
Dmxl2	ENSSGRP00000034524	ENSSGRP00000039801	ENSSGRP00000034524	DmX-like protein 2.	WD repeat-containing protein 7-like.	0.854
Dmxl2	ENSSGRP00000070730	ENSSGRP00000039801	ENSSGRP00000070730	DmX-like protein 2.	V-type H+-transporting ATPase subunit H.	0.792
Dmxl2	ENSSGRP00000083658	ENSSGRP00000039801	ENSSGRP00000083658	DmX-like protein 2.	Dmx-like 2.	0.544
Dmxl2	ENSSGRP00000104092	ENSSGRP00000039801	ENSSGRP00000104092	DmX-like protein 2.	Protein rogdi homolog.	0.926
Dmxl2	LOC107566902	ENSSGRP00000039801	ENSSGRP00000029547	DmX-like protein 2.	V-type H+-transporting ATPase subunit G.	0.855
Dmxl2	LOC107601278	ENSSGRP00000039801	ENSSGRP00000070980	DmX-like protein 2.	Protein rogdi homolog.	0.926
Dmxl2	Wdr7	ENSSGRP00000039801	ENSSGRP00000048599	DmX-like protein 2.	WD repeat-containing protein 7.	0.854
Dmxl2	skp1	ENSSGRP00000039801	ENSSGRP00000086959	DmX-like protein 2.	S-phase kinase-associated protein 1 isoform X1.	0.857
ENSSGRP00000010600	Atp6v1h	ENSSGRP00000010600	ENSSGRP00000040629	annotation not available	V-type proton ATPase subunit H isoform X1.	0.792