STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010600annotation not available (2802 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1 isoform X1.
    
 
 0.929
LOC107601278
Protein rogdi homolog.
    
 
 0.907
ENSSGRP00000104092
Protein rogdi homolog.
    
 
 0.907
LOC107579815
V-type H+-transporting ATPase subunit E.
    
 
 0.685
LOC107572551
V-type H+-transporting ATPase subunit E.
    
 
 0.685
LOC107583987
V-type proton ATPase subunit E 1-like.
    
 
 0.685
LOC107575294
V-type H+-transporting ATPase subunit E.
    
 
 0.685
ENSSGRP00000002849
annotation not available
    
 
 0.684
ENSSGRP00000009409
annotation not available
    
 
 0.684
ENSSGRP00000009412
annotation not available
    
 
 0.684
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.