Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctnnb1Catenin beta 1. (785 aa)    
Predicted Functional Partners:
LOC107564636
Cadherin 5, type 2, VE-cadherin.
    
 0.984
LOC107551739
Cadherin 5, type 2, VE-cadherin.
    
 0.984
LOC107584208
Protein chibby homolog 1-like.
    
 0.981
LOC107594427
Lymphoid enhancer-binding factor 1-like.
    
 0.981
Lef1
Lymphoid enhancer-binding factor 1.
    
 0.981
ENSSGRP00000011218
Cadherin 1, type 1, E-cadherin.
   
 0.979
ENSSGRP00000079598
Transcription factor 7.
    
 0.977
ENSSGRP00000086962
Transcription factor 7-like 2.
    
 0.977
LOC107549007
Adenomatous polyposis coli protein-like.
   
 0.969
LOC107570818
Beta-catenin-interacting protein 1 (inhibitor of beta-catenin and Tcf-4).
    
 0.969
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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