STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnnb1Catenin beta 1. (785 aa)    
Predicted Functional Partners:
LOC107570818
Beta-catenin-interacting protein 1 (inhibitor of beta-catenin and Tcf-4).
    
 0.997
LOC107549007
Adenomatous polyposis coli protein-like.
   
 0.991
LOC107568587
Adenomatous polyposis coli protein-like isoform X1.
   
 0.991
LOC107594427
Lymphoid enhancer-binding factor 1-like.
    
 0.990
Lef1
Lymphoid enhancer-binding factor 1.
    
 0.990
LOC107554841-2
Casein kinase I isoform X1.
   
 0.990
LOC107584430
RuvB-like protein 1 (pontin 52).
   
 0.987
LOC107568195
RuvB-like protein 1 (pontin 52).
   
 0.987
ENSSGRP00000095214
F-box/WD repeat-containing protein 11.
    
 0.986
skp1
S-phase kinase-associated protein 1 isoform X1.
   
 0.983
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.