STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573466Catenin alpha-2-like. (345 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
   
 0.982
LOC107570993
Catenin beta-1 isoform X1.
   
 0.982
ENSSGRP00000067405
Catenin beta-1-like.
   
 0.982
LOC107592060
Catenin beta-1-like.
   
 0.982
ENSSGRP00000004794
LOW QUALITY PROTEIN: vinculin-like.
    
 0.959
LOC107601794
Vinculin-like.
    
0.959
ENSSGRP00000049665
Vinculin-like.
    
0.959
ENSSGRP00000069703
LOW QUALITY PROTEIN: vinculin-like.
    
 0.959
LOC107591725
Actin, cytoplasmic 1.
    
 0.933
LOC107590707
Actin, cytoplasmic 1.
    
 0.933
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.