Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSSGRP00000010659DEAD (Asp-Glu-Ala-Asp) box polypeptide 47. (135 aa)    
Predicted Functional Partners:
ENSSGRP00000013069
UTP3 small subunit processome component.
   
  0.993
Pdcd11
RRNA biogenesis protein RRP5.
  
 0.989
wdr46
U3 small nucleolar RNA-associated protein 7.
   
 0.971
ENSSGRP00000043667
U3 small nucleolar RNA-associated protein 7.
   
 0.971
ENSSGRP00000017321
U3 small nucleolar ribonucleoprotein protein LCP5.
   
 0.963
ENSSGRP00000108372
U3 small nucleolar ribonucleoprotein protein LCP5.
   
 0.963
Dhx37
Probable ATP-dependent RNA helicase DHX37.
   
 0.962
ENSSGRP00000026240
annotation not available
   
 0.961
ENSSGRP00000066233
annotation not available
   
 0.961
ddx52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
   
 0.958
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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