STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107572324Ferritin, heavy subunit-like. (177 aa)    
Predicted Functional Partners:
LOC107559775
Nuclear receptor coactivator 4-like.
   
 0.954
ncoa4
Nuclear receptor coactivator 4.
     
  0.900
LOC107569691
Cytoglobin-1.
     
 0.750
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
     
 0.648
gak
Cyclin-G-associated kinase isoform X1.
     
 0.648
ENSSGRP00000079901
Cyclin G associated kinase.
     
 0.648
LOC107597423
Cytochrome c oxidase assembly protein subunit 17.
   
  
 0.595
LOC107569254
Cytochrome c oxidase assembly protein subunit 17.
   
  
 0.595
ENSSGRP00000008364
Immunoresponsive gene 1, like.
      
 0.548
LOC107573956
Cis-aconitate decarboxylase-like.
      
 0.548
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.