Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107554324Solute carrier family 25 (mitochondrial citrate transporter), member 1. (359 aa)    
Predicted Functional Partners:
LOC107550884
Malate synthase, glyoxysomal-like.
   
  
 0.854
ENSSGRP00000032468
MKL/myocardin-like protein 1.
   
 0.761
ENSSGRP00000035197
annotation not available
     
 0.625
ENSSGRP00000041142
annotation not available
     
 0.625
LOC107560058
39S ribosomal protein L40, mitochondrial-like.
      
 0.623
ENSSGRP00000102175
39S ribosomal protein L40, mitochondrial-like isoform X1.
      
 0.623
LOC107558052
MICOS complex subunit MIC60-like isoform X1.
    
 
 0.584
LOC107551004
MICOS complex subunit MIC60-like.
    
 
 0.584
SLC25A53
Solute carrier family 25 member 53.
      
 0.581
ENSSGRP00000053069
annotation not available
     
 0.573
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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