STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010688Solute carrier family 26 (sulfate anion transporter), member 6. (763 aa)    
Predicted Functional Partners:
ND4
NADH-ubiquinone oxidoreductase chain 4.
  
 
 0.715
mre11
Double-strand break repair protein MRE11A isoform X1.
  
   0.656
LOC107595996
Solute carrier family 30 (zinc transporter), member 5/7.
  
  
 0.649
LOC107600588
Solute carrier family 30 (zinc transporter), member 5/7.
  
  
 0.649
ENSSGRP00000023063
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
  
 0.634
slc13a3
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
  
 0.634
ENSSGRP00000042719
Acetyl-coenzyme A transporter 1-like.
      
 0.619
slc33a1
MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1.
      
 0.619
Slc22a13
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13.
   
 
 0.607
LOC107597582
Solute carrier family 15 (oligopeptide transporter), member 2.
  
 
 0.602
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.