STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107556486WD repeat-containing protein 6-like isoform X1. (1198 aa)    
Predicted Functional Partners:
LOC107591736
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1.
   
 
 0.989
LOC107589293
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
 
 0.989
ENSSGRP00000010003
Mitochondrial rRNA methyltransferase 2.
   
 
 0.931
mrm2
23S rRNA (uridine2552-2'-O)-methyltransferase.
   
 
 0.931
Ftsj3
AdoMet-dependent rRNA methyltransferase SPB1.
   
 
 0.912
LOC107559694
U3 small nucleolar RNA-associated protein 15 homolog.
   
    0.866
LOC107600050
U3 small nucleolar RNA-associated protein 15 homolog.
   
    0.866
ENSSGRP00000031192
Nucleolar protein 56-like isoform X1.
   
    0.860
ENSSGRP00000095040
Nucleolar protein 56-like.
   
    0.860
LOC107563281
Small integral membrane protein 12-like.
   
   0.858
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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